02110 Algorithms and Data Structures II

General Info

Teacher Associate Professor Inge Li Gørtz, office 018, building 322, Email: inge@dtu.dk. Office hours: Tuesday 12.15-13.

When Thursday 8-12. The course runs in the DTU fall semester.

Exercise class Thursday 8-10.30 in building 210, room 008 (English), 042, and 048.
The exercise classes will work as follows:

8.00-9.00 Group work. Time to work on the exercises you couldn't solve at home. The TAs will be there to help you.
9.00-10.30 Walk-through of solutions to the exercises. Together with the TA you will go through the solutions to the exercises in class. You are expected to have already solved the exercises and you should be prepared to present your solutions to the rest of the class.

Lectures Thursday 10.30-12 in Building 303A, auditorium 43.

Textbook CLRS: "Introduction to Algorithms", Cormen, Leierson, Rivest and Stein. 3rd edition. ISBN 978-0-262-53305-8

Piazza The course uses Piazza as onlineforum for discussion of material.

Prerequisites The course builds on 02105 Algorithms and Data Structures I. You are expected to know the curriculum for 02105, which includes

Basic algorithm analysis, asymptotic notation.
Data structures: stacks, queues, linked lists, trees, heaps, priority queues, hash tables, union-find, binary search trees.
Searching and sorting: binary search, heap sort, insertion sort, merge-sort.
Graph algorithms: single source shortest paths (Dijkstra and SSSP in DAGs), Minimum spanning trees, topological sorting, Breadth first search, Depth first search, representation of graphs.

CodeJudge Exercises marked with [CJ] are implementation exercises and can be tested in CodeJudge (https://dtu.codejudge.net/02110-e16). For each of these exercises, a detailed specification of the input/output and a java template can be found on CodeJudge.

Mandatory assignments

In order to be allowed to participate in the written exam it is a requirement that you:

pass at least 3 mandatory assignments from the week plans (more info below).
implement (and pass the tests of) two of the implementation exercises on CodeJudge.

Each week from week 1 to 9 you will be asked to do written exercises and hand them in during the group work. These exercises will be corrected by the teaching assistants. It is a requirement for participation in the exam that you get 3 of the 9 exercises approved. The exercises do not count in the final grade for the course, but you have to pass at least 3 of them in order to be allowed to participate in the exam.
The deadline for handing in the mandatory assignment on weekplan x is Thursday in week x+1 at 9:00. The deadline for handing in the home work must be respected.
You are welcome to hand in more than 3 - the TAs will correct all the home work you hand in.
The deadline for passing the implementation exercises is Thursday in week 11.

Programming Competition

The programming competition is now on. There will be a prize for the best three teams. Participation in the programming competition counts as a mandatory CodeJudge exercise if you pass a certain set of the test cases.The deadline is November 24th 23.59. The rules and the description of the programming competition is here.

Weekplan

The weekplan is preliminary It will be updated during the course.

Topics	Slides	Weekplan	Material	Demos
Data Structures I: Red-Black trees and 2-3-4 trees	1x1 · 4x1 · full	Week 1	Algorithms in Java by Sedgewick, page 572--585 (on Campusnet) CLRS chapter 13 Survival guide
Data Structures II: Amortized Analysis + splay trees.	1x1 · 4x1 · full	Week 2	Section 15 + 16.5-16.6 in notes by Jeff Erickson (can also be found on CampusNet) (CLRS chapter 17)	Splay Trees Splay Trees Deletions
Dynamic programming I: Rod cutting and longest common subsequence	1x1 · 4x1· full	Week 3	CLRS 15.0-15.1, (15.3), 15.4
Dynamic programming II: Sequence alignment and All Pairs Shortest Paths	1x1 · 4x1 · full	Week 4	CLRS 25.0, 25.1 Algorithm Design by Kleinberg and Tardos, section 6.6 (on CampusNet).	Sequence Alignment
Network Flow I: Max-cut min-flow theorem, augmenting paths, Ford-Fulkerson	1x1 · 4x1 · full	Week 5	CLRS 26.1, 26.2	Ford Fulkerson and min cut
Network Flow II: Edmonds-Karp, maximum bipartite matching	1x1 · 4x1 · full	Week 6	CLRS 26.2, 26.3
Strings I: String matching	1x1 · 4x1	Week 7	CLRS 32.0, 32.3, 32.4	Automata matching and construction KMP matching and construction
Programming competition		Week 8
Strings II: Suffix trees	1x1 · 4x1 · full	Week 9	Data Structures & Algorithms in Java by Goodrich and Tamassia, section 12.3 (on CampusNet)	trie search and trie construction
Randomized Algorithms: Introduction, quicksort, selection.	1x1 · 4x1	Week 10	CLRS chapter 7, 9.2 notes by Paul Fischer on randomized algorithms section 1, 2 (except 2.4 and 2.5) Alternative reading: Algorithm Design by Kleinberg and Tardos, section 13.5 (on CampusNet).
Computational Geometry: Convex hull	1x1 · 4x1	Week 11	CLRS 33.0, 33.1, 33.3 Alternative reading: notes by Jeff Erickson	Graham's scan and Jarvis's march
Introduction to NP-completenes	1x1 · 4x1	Week 12	Notes by Paul Fischer Appendix C CLRS 34.0-34.2 + 34.3 until page 1069 (page 1048-1069)
Questions, repetition, prize for programming competition	1x1 · 4x1	Week 13

Old Exam Sets

Here is the exam set from the two previous years: ExamE15, ExamE14 and a solution to E14.
And an example exam: ExampleExam.

Solutions to selected exercises

Here are solutions to a couple of exam like exercises, such that you can see how a well written solution could be: Example solutions.

Frequently Asked Questions

How should I write my mandatory exercises?Here is a few tips:

Write things directly: Cut to the chase and avoid anything that is not essential. Test your own writing by answering the following question: “Is this the shortest, clearest, and most direct exposition of my ideas/analysis/etc.?”
Add structure: Don’t mix up description and analysis unless you know exactly what you are doing. For a data structure explain following things separately: The contents of the data structure, how to build it, how to query/update it, correctness, analysis of space, analysis of query/update time, and analysis of preprocessing time. For an algorithm explain separately what it does, correctness, analysis of time complexity, and analysis of space complexity.
Be concise: Convoluted explanations, excessively long sentences, fancy wording, etc. have no in place scientific writing. Do not repeat the problem statement.
Try to avoid pseudocode: Generally, aim for human readable description of algorithms that can easily and unambiguously be translated into code.
The only exception for this is dynamic programming algorithms, where pseudo code is often the best choice.
Examples for support: Use figures and examples to illustrate key points of your algorithms and data structures.

Can I write my assignments in Danish? Ja. Du er meget velkommen til at aflevere på dansk. Det samme gælder til eksamen.